Funded projects

You can read presentation materials, reports, evaluation materials from progress meetings and symposiums for each project at the links below.

• Development of a sustainable database for middle molecules using AI-driven data curation
  IKEDA Kazuyoshi
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2024-Fostering
• Development of the"Cell IO"database linking cellular level functions and phenotypes with gene expression
  OZAKI Haruka
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2024-Fostering
• Integrated Metabolome Database for the Creation of Knowledge
  HAYAKAWA Eisuke
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2024-Fostering
• Platform of gene network information for non-model plants
  OBAYASHI Takeshi
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2023-Fostering
• Development of research and educational platform with open human genomic and omics international database
  NAGASAKI Masao
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2023-Fostering
• Development of a database for spatial genomics data analysis
  VANDENBON Alexis
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2023-Fostering
• jPOST prime: proteome database environment based on community cooperation
  ISHIHAMA Yasushi
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2023-Full-fledged
• Development of next generation mass spectra data base, Shin-MassBank
  MATSUDA Fumio
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2023-Full-fledged
• Development of a global data sharing system for bioimaging data
  ONAMI Shuichi
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2022-Full-fledged
• Construction of an integrative data platform for transcriptional regulations
  KASUKAWA Takeya
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2022-Full-fledged
• Integrated database linking human and pathogen genomes to diseases and drugs
  KANEHISA Minoru
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2022-Full-fledged
• Data expansion and quality improvement of the Glycoscience Portal aiming towards interdisciplinary fusion
  AOKI-KINOSHITA Kiyoko
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2022-Full-fledged
• Advanced development of Protein Data Bank extended as the Data-driven research platform.
  KURISU Genji
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2022-Full-fledged
• Development of an integrated microbiome data hub for microbiome research
  MORI Hiroshi
  In progressDatabase Integration Coordination Program (DICP)Projects funded in FY 2022-Full-fledged
• Platform of metabolome informatics considering the material cycle
  ARITA Masanori
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2018
• Development of functional and interactive database for proteomics
  ISHIHAMA Yasushi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2018
• Development of an integrative epigenome database
  OKI Shinya
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2017
• Network database integrating genomes, diseases and drugs
  KANEHISA Minoru
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2017
• Construction of a Glycoscience Portal
  AOKI-KINOSHITA Kiyoko
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2017
• Upgrading data validation and integration for Protein Data Bank
  KURISU Genji
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2017
• Advanced practical development of the integrated database for microbes "MicrobeDB.jp"
  KUROKAWA Ken
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2017
• DBKERO; a database to integrate multi-omics data for interpretation and functional annotations of human genome variations in diseases
  SUGANO Sumio
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2017
• Development of a new platform for plant genome information analyses toward an era of individual genomes
  TABATA Satoshi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2017
• Development of an Integrated Database for Proteomes
  ISHIHAMA Yasushi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2015
• Integrated database for biological dynamics and images of cell and developmental biology
  ONAMI Shuichi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2015
• Integrative database for exploiting published ChIP-seq data
  OKI Shinya
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2015
• Development of a mobile application for cross-search of various herbal medicines
  KATSURAGI Tetsuo
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2015
• Interaction energy analysis between lectin and glycochain based on quantum mechanical calculation
  NAKANO Shogo
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2015
• Designing Metabolome Models for Biological Species
  ARITA Masanori
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Integrated database linking genomes to phenotypes, diseases and drugs
  KANEHISA Minoru
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Advancement of MicrobeDB.jp with integration of genomic and metagenomic information
  KUROKAWA Ken
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Integration of Transcriptome Database with Multi-Omics Data and Disease-associated Human Variations
  SUGANO Sumio
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Plant Genome DataBase Japan (PGDBj) for integration of plant genome-related resources and information
  TABATA Satoshi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Human Genome Variation Database towards personalized medicine
  TOKUNAGA Katsushi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Upgrading and Integrative Management of Protein Data Bank Japan
  NAKAMURA Haruki
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Development of an international glycan structure repository and integrated glycan database
  NARIMATSU Hisashi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Development of the integrated database of phenome
  MASUYA Hiroshi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2014
• Development of pdbBAM, comprehensive mapping of PDBj protein sequences on human genome
  SHIROTA Matsuyuki
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2014
• A general framework for interlinking data between RDF stores and its application to ortholog analysis
  CHIBA Hirokazu
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2014
• An extension of biochemical reaction network analysis environment
  NISHIDA Kozo
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2014
• Pipeline of phase-defined complete sequencing for the HLA genes
  HOSOMICHI Kazuyoshi
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2014
• Fast feature selection method for large-scale analysis of local sequence/structure/function relationships in proteins
  EBINA Teppei
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• Network analysis system for genome-scale metabolic models with multi-omics data
  NISHIDA Kozo
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• Integration of KNApSAcK and the other chemical databases to understand efficacy of plants on human at the molecular level
  NISHIMURA Yosuke
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• Development of a pipeline for generating ligand - protein binding site prediction tools using machine learning
  BANNO Masaki
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• AtMetExpress: a database for mass spectrometry-based metabolite profiling data in Arabidopsis and development of related tools to facilitate omics-data integration
  FUKUSHIMA Atsushi
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• Development of a method for detecting functional modules by analyzing co-occurrences of metadata in protein
  FUJII Satoshi
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• Development of a web tool for the elucidation of glycan binding patterns of protein-glycan interaction
  HOSODA Masae
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• Development of a metagenomic analysis pipeline that utilizes the MicrobeDB.jp data
  MORI Hiroshi
  CompletedDICP Tool Prototype Trial for Integrated Database AnalysisProjects funded in FY 2013
• Integration of databases for systems science of biological dynamics
  ONAMI Shuichi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2012
• Study on integration of the human brain related diseases imaging data
  IWATSUBO Takeshi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Development of a metabolome database
  KANAYA Shigehiko
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Genome-based integrated information resource for diseases, drugs, and environmental substances
  KANEHISA Minoru
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Integration of a microorganism database based on genomic and metagenomic information
  KUROKAWA Ken
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Integration of plant databases based on genome information
  TABATA Satoshi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Development of a human genome-variation database
  TOKUNAGA Katsushi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Integrated phenome database of life and environment
  TOYODA Tetsuro
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• International Construction and Integration of Protein Structure Databank
  NAKAMURA Haruki
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Development of integrated glycoscience database and research-support tools
  NARIMATSU Hisashi
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Construction of a foundation of integrated information for large-scale genome cohort studies
  MATSUDA Fumihiko
  CompletedDatabase Integration Coordination Program (DICP)Projects funded in FY 2011
• Development of fundamental technologies related to integration of databases
  KOHARA YujiYONEZAWA Akinori
  CompletedCore Technology Development ProgramProjects funded in FY 2011