Integration of Transcriptome Database with Multi-Omics Data and Disease-associated Human Variations

Category

  • Completed
  • Database Integration Coordination Program (DICP)
  • Projects funded in FY 2014

Name and affiliation of Research Director

SUGANO Sumio

Professor, Graduate School of Frontier Sciences, University of Tokyo

Outline of R&D

Our database, DBTSS (http://dbtss.hgc.jp/), includes TSS data of a major part of human adult and embryonic tissues. We associated the TSS and other omics information with public and original SNV data. By this approach, we attempted to identify single nucleotide variations (SNVs) in the regulatory regions which may invoke altered transcriptional regulations.

Main database(s) subject to research and development

Period of research and development

April 2014 to March 2017

DocumentsOnly in Japanese

Presentation documents

Reports

EvaluationOnly in Japanese

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