Development of a database for spatial genomics data analysis
Category
- In progress
- Database Integration Coordination Program (DICP)
- Projects funded in FY 2023-Fostering
Name and affiliation of Research Director
VANDENBON Alexis
Associate Professor, Institute for Life and Medical Sciences, Kyoto University
Outline of R&D
We will construct a database that allows users to easily access publicly available spatial transcriptome data of various tissues obtained using major platforms. This database will allow anyone to easily verify hypotheses based on bulk RNA-seq obtained from the whole tissue, or to develop new hypotheses based on the spatial transcriptome analysis.
Main database(s) subject to research and development
Spatial Genomics Atlas of Cells and Tissues (temporary name)
Period of research and development
Apr 2023 to Mar 2026
Grant Number
JPMJND2303
