Development of a metagenomic analysis pipeline that utilizes the MicrobeDB.jp data
Category
- Completed
- DICP Tool Prototype Trial for Integrated Database Analysis
- Projects funded in FY 2013
Name and affiliation of Research Director
MORI Hiroshi
Assistant Professor , Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology
Outline of R&D
The aim of this study is to develop a web application that can analyze user-uploaded metagenomic sequence data by applying the metagenomic analysis pipeline used in the MicrobeDB.jp. This web application will provide the basic information on the microbial community (e.g., the taxonomic and functional composition). In addition, users can compare this information with other metagenomic samples exist in the MicrobeDB.jp.
Main database(s) subject to research and development
- MeGAP
Period of research and development
September 2013 to January 2014
