AtMetExpress: a database for mass spectrometry-based metabolite profiling data in Arabidopsis and development of related tools to facilitate omics-data integration
Category
- Completed
- DICP Tool Prototype Trial for Integrated Database Analysis
- Projects funded in FY 2013
Name and affiliation of Research Director
FUKUSHIMA Atsushi
Research Scientist, Metabolome Informatics Research Team, Metabolomics Research Group, Center for Sustainable Resource Science, RIKEN
Outline of R&D
The project develops AtMetExpress system, consisting of a database for mass spectrometry-based metabolite profiling data in the model plant Arabidopsis (Arabidopsis thaliana) and related tools facilitating omics-data integration. The purpose of this study is to integrate publicly available metabolome datasets with other resources at National Bioscience Database Center (NBDC) to efficiently realize knowledge discovery in plant metabolomics.
Main database(s) subject to research and development
Period of research and development
September 2013 to January 2014
