DICP Tool Prototype Trial for Integrated Database Analysis

Completed

FY 2015

The program of the Tool Prototype Trial promotes the development of tools for analyzing data recorded in the databases developed (or being developed) by the Database Integration Coordination Program and utilization of the developed tools to discover new knowledge. This program is carried out as part of the Database Integration Coordination Program. The purpose of this program is to present new examples of database usage from the user's perspective. We anticipate that these programs will present examples of usage based on fresh perspectives and free ideas.

Research Supervisor

NAGASU Takeshi

Previously worked at Eisai Co., Ltd

Research Advisors

ITOH Takehiko	Professor, Department of Biological Information, Graduate School of Bioscience and Biotechnology, Tokyo institute of Technology
ONAMI Shuichi	Team Leader, Laboratory for Developmental Dynamics, Quantitative Biology Center, RIKEN
KOIKE Asako	Director-General, Central Research Laboratory, Hitachi, Ltd.
GOTO Susumu	Associate Professor, Laboratory of Chemical Life Science, Bioinformatics Center, Institute for Chemical Research, Kyoto University
SHIKANAI Toshihide	Invited Senior Researcher, Glycoscience and Glycotechnology Research Group, Biotechnology Research Group, Biotechnology Research Institute for Drug Discovery, Department of Life Science and Biotechnology, Advanced Industrial Science and Technology (AIST)
SESE Jun	Senior Researcher, Computational Functional Genomics Research Group, Biotechnology Research Institute for Drug Discovery, Advanced Industrial Science and Technology (AIST)
TAKAHASHI Shoko	President & CEO, Genequest Inc.
TAKAHASHI Masumi	CEO, iBioTech Co., Ltd.
TOH Hiroyuki	Professor, School of Science and Technology, KWANSEI GAKUIN University
NAKAYAMA Hideki	Lecturer, Dept. of Creative Informatics, Grad. School of Information Science and Technology, The University of Tokyo

(As of June 1, 2015, in order of the Japanese syllabary)

Funded Projects of this Program

Projects funded in FY 2015

Integrative database for exploiting published ChIP-seq data

OKI Shinya
Development of a mobile application for cross-search of various herbal medicines

KATSURAGI Tetsuo
Interaction energy analysis between lectin and glycochain based on quantum mechanical calculation

NAKANO Shogo

FY 2014

Research Supervisor

NAGASU Takeshi

Previously worked at Eisai Co., Ltd

Research Advisors

ITOH Takehiko	Professor, Department of Biological Information, Graduate School of Bioscience and Biotechnology, Tokyo institute of Technology
ONAMI Shuichi	Team Leader, Laboratory for Developmental Dynamics, Quantitative Biology Center, RIKEN
KOIKE Asako	Director-General, Central Research Laboratory, Hitachi, Ltd.
GOTO Susumu	Associate Professor, Laboratory of Chemical Life Science, Bioinformatics Center, Institute for Chemical Research, Kyoto University
SHIKANAI Toshihide	Invited Senior Researcher, Glycoscience and Glycotechnology Research Group, Biotechnology Research Group, Biotechnology Research Institute for Drug Discovery, Department of Life Science and Biotechnology, Advanced Industrial Science and Technology (AIST)
SESE Jun	Senior Researcher, Computational Functional Genomics Research Group, Biotechnology Research Institute for Drug Discovery, Advanced Industrial Science and Technology (AIST)
TAKAHASHI Shoko	President & CEO, Genequest Inc.
TAKAHASHI Masumi	CEO, iBioTech Co., Ltd.
TOH Hiroyuki	Professor, School of Science and Technology, KWANSEI GAKUIN University
NAKAYAMA Hideki	Lecturer, Dept. of Creative Informatics, Grad. School of Information Science and Technology, The University of Tokyo

(As of June 1, 2015, in order of the Japanese syllabary)

Funded Projects of this Program

Projects funded in FY 2014

Development of pdbBAM, comprehensive mapping of PDBj protein sequences on human genome

SHIROTA Matsuyuki
A general framework for interlinking data between RDF stores and its application to ortholog analysis

CHIBA Hirokazu
An extension of biochemical reaction network analysis environment

NISHIDA Kozo
Pipeline of phase-defined complete sequencing for the HLA genes

HOSOMICHI Kazuyoshi

FY 2013

The Tool Prototype Trial promotes the development of tools for analyzing data recorded in the databases developed by the Database Integration Coordination Program and utilization of the developed tools to discover new knowledge. The program of the Tool Prototype Trial is carried out as part of the Database Integration Coordination Program.

Research Supervisor

TAKAGI Toshihisa

Sub-director, National Bioscience Database Center (At the time)

Research Advisors

SESE Jun	Associate Professor, Graduate School of Information Science and Engineering, Tokyo Institute of Technology

(As of October 1, 2013)

DICP Tool Prototype Trial for Integrated Database Analysis

FY 2015

Outline

Research Supervisor

Research Advisors

Funded Projects of this Program

Projects funded in FY 2015

Inquiries & opinions